RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38-1L2OjajRh_nHD2WUKfFNA
Description:histone cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:4916]
Name(s) HIRA, DGCR1, TUP1, TUPLE1
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 22:19330698-19447450 - protein_coding
Expressed in:
  Adipose, Adrenal, Bladder, Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, HK-2 Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Muscle, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Proximal Tubule, Testis
Enriched in:
  Epithelial Cells, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, HK-2 Cells, Kidney, Liver, Nephron Progenitor Cells
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh382h4NNoR3aZRldqmjT4gF6g HIRA-001 transcript 22:19330698-19431733 (-) GRCh38
UT_GRCh38D7VnybrP1kfvhI74OORsfQ HIRA-002 transcript 22:19330698-19431696 (-) GRCh38
UT_GRCh38M6jHFyyZSauUwHqzBNIBzQ HIRA-004 transcript 22:19398068-19447450 (-) GRCh38
UT_GRCh38x2O3WyPulZUzpLRFU15jOQ HIRA-003 transcript 22:19398061-19430263 (-) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology
GO ID Domain Evidence Type GO Description
GO:0000790 cellular_component IDA nuclear chromatin
GO:0001649 biological_process IEA osteoblast differentiation
GO:0003700 molecular_function TAS transcription factor activity, s
GO:0003714 molecular_function TAS transcription corepressor activi
GO:0005515 molecular_function IEA protein binding
GO:0005515 molecular_function IPI protein binding
GO:0005634 cellular_component IDA nucleus
GO:0005634 cellular_component IEA nucleus
GO:0005654 cellular_component IDA nucleoplasm
GO:0005654 cellular_component TAS nucleoplasm
GO:0006336 biological_process IDA DNA replication-independent nucl
GO:0006351 biological_process IEA transcription, DNA-templated
GO:0006355 biological_process IEA regulation of transcription, DNA
GO:0006357 biological_process TAS regulation of transcription from
GO:0007369 biological_process IEA gastrulation
GO:0009653 biological_process TAS anatomical structure morphogenes
GO:0016568 biological_process IEA chromatin modification
GO:0016605 cellular_component IEA PML body
GO:0042692 biological_process IEA muscle cell differentiation
GO:0043234 cellular_component IDA protein complex
GO:0070062 cellular_component IDA extracellular exosome
GO:1903507 biological_process TAS negative regulation of nucleic a

Homologs
Accession Description Species Homolog Type
UG_GRCm38RM_W9Ft4Ouc-hE3hqAMvKw Hira 10090 ortholog_one2one
UG_GRCz10bqCsgL5vac3BkHfvbuh4aA hira 7955 ortholog_one2one

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