RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38-Bj2DApb2srCrM8bemL0UQ
Description:collagen, type VI, alpha 6 [Source:HGNC Symbol;Acc:HGNC:27023]
Name(s) COL6A6
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 3:130560334-130678155 + protein_coding
Expressed in:
  Adipose, Adrenal, Bladder, Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, HK-2 Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Muscle, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Proximal Tubule, Testis
Enriched in:
  Brain, Breast, Colon, Heart, Kidney, Liver, Lung, Muscle, Ovary
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh382vj14wC3tYNPXUlNbtKNaQ COL6A6-001 transcript 3:130560334-130678155 (+) GRCh38
UT_GRCh38f_dc4NKjVXfAulieVLUuyQ COL6A6-003 transcript 3:130581741-130593224 (+) GRCh38
UT_GRCh38jNXPGJcmNn_DSYwgJQ1Weg COL6A6-002 transcript 3:130581682-130677044 (+) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology
GO ID Domain Evidence Type GO Description
GO:0005576 cellular_component IEA extracellular region
GO:0005576 cellular_component TAS extracellular region
GO:0005578 cellular_component IDA proteinaceous extracellular matr
GO:0005581 cellular_component IEA collagen trimer
GO:0007155 biological_process IEA cell adhesion
GO:0022617 biological_process TAS extracellular matrix disassembly
GO:0030198 biological_process TAS extracellular matrix organizatio
GO:0030574 biological_process TAS collagen catabolic process

Homologs
Accession Description Species Homolog Type
UG_GRCm38NFki5Q77wlEBTpVkZSJ9tA Col6a6 10090 ortholog_one2one
UG_GRCz104bojdcizC5FiBsDCOZWuVw col6a6 7955 ortholog_one2many

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