RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38-baDmbRKL4xc3nQ7Wpi5lw
Description:major histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:HGNC:4935]
Name(s) HLA-DMB, D6S221E, RING7
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 6:32934629-32941070 - protein_coding
Expressed in:
  Adipose, Adrenal, Bladder, Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, HK-2 Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Muscle, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Proximal Tubule, Testis
Enriched in:
  Adrenal, Bladder, Breast, Colon, HK-2 Cells, Kidney, Kidney Cortex, Liver, Lung, Nephron Progenitor Cells, Ovary, Placenta
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh381FnsqpGVy7baGhHm49CLDg HLA-DMB-004 transcript 6:32934629-32936901 (-) GRCh38
UT_GRCh38FLSfgxuxxvLZ8zkYa5KD5Q HLA-DMB-006 transcript 6:32934629-32938688 (-) GRCh38
UT_GRCh38ILlDNW9cJrfZilO4CNov0A HLA-DMB-003 transcript 6:32934629-32940984 (-) GRCh38
UT_GRCh38lh_7gyhrMTwZSFG5L3A1GQ HLA-DMB-007 transcript 6:32934629-32937439 (-) GRCh38
UT_GRCh38mxFZOQRrS4If3CQIAPDBLg HLA-DMB-001 transcript 6:32934629-32941070 (-) GRCh38
UT_GRCh38Xv5y2J-dEwnzAk0QRdsQ8A HLA-DMB-005 transcript 6:32934629-32936886 (-) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology

GO ID Domain Evidence Type GO Description
GO:0002399 biological_process IMP MHC class II protein complex ass
GO:0002503 biological_process IDA peptide antigen assembly with MH
GO:0005515 molecular_function IEA protein binding
GO:0005765 cellular_component TAS lysosomal membrane
GO:0006955 biological_process IEA immune response
GO:0016020 cellular_component IEA membrane
GO:0016021 cellular_component IEA integral component of membrane
GO:0019882 biological_process IEA antigen processing and presentat
GO:0019886 biological_process IMP antigen processing and presentat
GO:0019886 biological_process TAS antigen processing and presentat
GO:0023026 molecular_function IDA MHC class II protein complex bin
GO:0031902 cellular_component IEA late endosome membrane
GO:0042102 biological_process IMP positive regulation of T cell pr
GO:0042613 cellular_component IDA MHC class II protein complex
GO:0042613 cellular_component IEA MHC class II protein complex
GO:2001190 biological_process IMP positive regulation of T cell ac

Homologs

Accession Description Species Homolog Type
UG_GRCm385x8Zhz5X_E5gxOtH5RrJTA H2-DMb1 10090 ortholog_many2many
UG_GRCm38tQgFnSTw1ILA4xVg_8RCqQ H2-DMb2 10090 ortholog_many2many
UG_GRCz102lPS3qhP_Ia9DBm0srK0Ng si:busm1-104n07.3 7955 ortholog_many2many
UG_GRCz106N796CupK03WDk9FB6V2qA si:busm1-228j01.4 7955 ortholog_many2many
UG_GRCz1086hL4il1eVUbFv2c_4m1LA mhc2dbb 7955 ortholog_many2many
UG_GRCz109k9Ck9C3D5rqekcEeaePLw si:busm1-228j01.6 7955 ortholog_many2many
UG_GRCz10BRpv7L48ovJln471ySfhGg zgc:103700 7955 ortholog_many2many
UG_GRCz10c4kTr4kjF8sD0xl6DLqMXQ si:busm1-194e12.12 7955 ortholog_many2many
UG_GRCz10Dd_oreLGUQ6HF8D6a-ipCg wu:fd58b11 7955 ortholog_many2many
UG_GRCz10IZ3tyXoSOv7mVsE_bweQbw mhc2dab 7955 ortholog_many2many
UG_GRCz10UXA9EdGMUhzQfktjRQY1rQ si:dkey-33b17.3 7955 ortholog_many2many
UG_GRCz10wltTzso6YqZ7oUF5AWHH5w si:zfos-2070c2.3 7955 ortholog_many2many

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