RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38-fOa_Vchq5c09R1cemh8FA
Description:sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Source:HGNC Symbol;Acc:HGNC:11121]
Name(s) SMPD2, ISC1, nSMase
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 6:109440763-109443919 + protein_coding
Expressed in:
  Adipose, Adrenal, Bladder, Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, HK-2 Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Muscle, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Proximal Tubule, Testis
Enriched in:
  Epithelial Cells, HEK-293T Cells, HK-2 Cells, Kidney, Ovary, Testis
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh38L8bgQaYQtv6Zfls6ILLb_g SMPD2-003 transcript 6:109442571-109443556 (+) GRCh38
UT_GRCh38LGAbSUwM12vLlOSjv80-_w SMPD2-001 transcript 6:109440763-109443919 (+) GRCh38
UT_GRCh38UQvmuqpVnLy1HdoqzNBJ3A SMPD2-002 transcript 6:109441603-109442571 (+) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology

GO ID Domain Evidence Type GO Description
GO:0004767 molecular_function IEA sphingomyelin phosphodiesterase
GO:0005622 cellular_component IEA intracellular
GO:0005886 cellular_component TAS plasma membrane
GO:0005887 cellular_component TAS integral component of plasma mem
GO:0005901 cellular_component IEA caveola
GO:0006665 biological_process TAS sphingolipid metabolic process
GO:0006684 biological_process TAS sphingomyelin metabolic process
GO:0006687 biological_process TAS glycosphingolipid metabolic proc
GO:0007166 biological_process TAS cell surface receptor signaling
GO:0009612 biological_process IEA response to mechanical stimulus
GO:0016020 cellular_component IEA membrane
GO:0033209 biological_process TAS tumor necrosis factor-mediated s
GO:0035556 biological_process IEA intracellular signal transductio
GO:0044281 biological_process TAS small molecule metabolic process
GO:0046513 biological_process IEA ceramide biosynthetic process
GO:0046872 molecular_function IEA metal ion binding
GO:0048011 biological_process TAS neurotrophin TRK receptor signal
GO:0097190 biological_process TAS apoptotic signaling pathway
GO:2000304 biological_process TAS positive regulation of ceramide

Homologs

Accession Description Species Homolog Type
UG_GRCm381SwfYGZKjixA822UF0z8Mg Smpd2 10090 ortholog_one2one
UG_GRCz10OCRfbxU57u-jqYOQZCwPZA smpd2a 7955 ortholog_one2many
UG_GRCz10_-12cFJsKJw01ZnHDZGPrA smpd2b 7955 ortholog_one2many

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