RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38AvkD4-6CmvWlLM0BRucsNQ
Description:major histocompatibility complex, class II, DQ beta 2 [Source:HGNC Symbol;Acc:HGNC:4945]
Name(s) HLA-DQB2, HLA-DXB
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 6:32756098-32763534 - protein_coding
Expressed in:
  Adipose, Adrenal, Bladder, Brain, Breast, Colon, Heart, HEK-293 Cells, HEK-293T Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Testis
Enriched in:
  Adipose, Adrenal, Breast, Colon, Kidney, Kidney Tubules, Lung, Nephron Progenitor Cells
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh38I2AjZL98Qt_7DqtCZf-YgA HLA-DQB2-001 transcript 6:32756098-32763532 (-) GRCh38
UT_GRCh38iNF9vuJLJjZCiHexCbvyHg HLA-DQB2-004 transcript 6:32756388-32763466 (-) GRCh38
UT_GRCh38RkYdRsR7qqf56Z-t6Rsung HLA-DQB2-002 transcript 6:32756098-32763490 (-) GRCh38
UT_GRCh38SWs9c8iZkbCNhEQFaxQsTA HLA-DQB2-003 transcript 6:32756098-32763534 (-) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology
GO ID Domain Evidence Type GO Description
GO:0000139 cellular_component TAS Golgi membrane
GO:0002504 biological_process IEA antigen processing and presentat
GO:0005515 molecular_function IEA protein binding
GO:0005765 cellular_component TAS lysosomal membrane
GO:0005886 cellular_component TAS plasma membrane
GO:0006955 biological_process IEA immune response
GO:0006955 biological_process NAS immune response
GO:0010008 cellular_component IEA endosome membrane
GO:0012507 cellular_component TAS ER to Golgi transport vesicle me
GO:0016020 cellular_component IEA membrane
GO:0016021 cellular_component IEA integral component of membrane
GO:0019221 biological_process TAS cytokine-mediated signaling path
GO:0019882 biological_process IEA antigen processing and presentat
GO:0019886 biological_process TAS antigen processing and presentat
GO:0030658 cellular_component TAS transport vesicle membrane
GO:0030666 cellular_component TAS endocytic vesicle membrane
GO:0030669 cellular_component TAS clathrin-coated endocytic vesicl
GO:0031295 biological_process TAS T cell costimulation
GO:0032395 molecular_function NAS MHC class II receptor activity
GO:0032588 cellular_component TAS trans-Golgi network membrane
GO:0042613 cellular_component IEA MHC class II protein complex
GO:0042613 cellular_component NAS MHC class II protein complex
GO:0050852 biological_process TAS T cell receptor signaling pathwa
GO:0060333 biological_process TAS interferon-gamma-mediated signal
GO:0071556 cellular_component TAS integral component of lumenal si

Homologs
Accession Description Species Homolog Type
UG_GRCm38KkDUSUXZxEI7ZuNmVT-lew H2-Ab1 10090 ortholog_one2many
UG_GRCz102lPS3qhP_Ia9DBm0srK0Ng si:busm1-104n07.3 7955 ortholog_many2many
UG_GRCz106N796CupK03WDk9FB6V2qA si:busm1-228j01.4 7955 ortholog_many2many
UG_GRCz1086hL4il1eVUbFv2c_4m1LA mhc2dbb 7955 ortholog_many2many
UG_GRCz109k9Ck9C3D5rqekcEeaePLw si:busm1-228j01.6 7955 ortholog_many2many
UG_GRCz10BRpv7L48ovJln471ySfhGg zgc:103700 7955 ortholog_many2many
UG_GRCz10c4kTr4kjF8sD0xl6DLqMXQ si:busm1-194e12.12 7955 ortholog_many2many
UG_GRCz10Dd_oreLGUQ6HF8D6a-ipCg wu:fd58b11 7955 ortholog_many2many
UG_GRCz10IZ3tyXoSOv7mVsE_bweQbw mhc2dab 7955 ortholog_many2many
UG_GRCz10UXA9EdGMUhzQfktjRQY1rQ si:dkey-33b17.3 7955 ortholog_many2many
UG_GRCz10wltTzso6YqZ7oUF5AWHH5w si:zfos-2070c2.3 7955 ortholog_many2many

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