RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38vsd792egWOwaRT1zfFjpag
Description:major histocompatibility complex, class II, DO beta [Source:HGNC Symbol;Acc:HGNC:4937]
Name(s) HLA-DOB, DOB
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 6:32812763-32817048 - protein_coding
Expressed in:
  Adipose, Adrenal, Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Muscle, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Proximal Tubule, Testis
Enriched in:
  Adrenal, Breast, Epithelial Cells, Kidney, Kidney Cortex, Lung, Ovary
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh38e5fn0s0jjyFOZfHDk8BiUg HLA-DOB-003 transcript 6:32812763-32816976 (-) GRCh38
UT_GRCh38iH1DActyLbrUAhe0XBWMOA HLA-DOB-002 transcript 6:32813047-32816988 (-) GRCh38
UT_GRCh38PxqX05NdFSvx6qV-vftxNw HLA-DOB-004 transcript 6:32814370-32816910 (-) GRCh38
UT_GRCh38x_qTgqRV6Edqe49OHzwBvw HLA-DOB-001 transcript 6:32812763-32817048 (-) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology
GO ID Domain Evidence Type GO Description
GO:0002504 biological_process IEA antigen processing and presentat
GO:0002587 biological_process IDA negative regulation of antigen p
GO:0005515 molecular_function IEA protein binding
GO:0005622 cellular_component IEA intracellular
GO:0005764 cellular_component IDA lysosome
GO:0005765 cellular_component TAS lysosomal membrane
GO:0006955 biological_process IEA immune response
GO:0007165 biological_process TAS signal transduction
GO:0010008 cellular_component IEA endosome membrane
GO:0016020 cellular_component IEA membrane
GO:0016021 cellular_component IEA integral component of membrane
GO:0019882 biological_process IEA antigen processing and presentat
GO:0019886 biological_process TAS antigen processing and presentat
GO:0023026 molecular_function IDA MHC class II protein complex bin
GO:0032395 molecular_function TAS MHC class II receptor activity
GO:0042613 cellular_component IDA MHC class II protein complex
GO:0042613 cellular_component IEA MHC class II protein complex

Homologs
Accession Description Species Homolog Type
UG_GRCm38Oi8-7wRwf4OjaugeSWqMdQ H2-Ob 10090 ortholog_one2one
UG_GRCz102lPS3qhP_Ia9DBm0srK0Ng si:busm1-104n07.3 7955 ortholog_many2many
UG_GRCz106N796CupK03WDk9FB6V2qA si:busm1-228j01.4 7955 ortholog_many2many
UG_GRCz1086hL4il1eVUbFv2c_4m1LA mhc2dbb 7955 ortholog_many2many
UG_GRCz109k9Ck9C3D5rqekcEeaePLw si:busm1-228j01.6 7955 ortholog_many2many
UG_GRCz10BRpv7L48ovJln471ySfhGg zgc:103700 7955 ortholog_many2many
UG_GRCz10c4kTr4kjF8sD0xl6DLqMXQ si:busm1-194e12.12 7955 ortholog_many2many
UG_GRCz10Dd_oreLGUQ6HF8D6a-ipCg wu:fd58b11 7955 ortholog_many2many
UG_GRCz10IZ3tyXoSOv7mVsE_bweQbw mhc2dab 7955 ortholog_many2many
UG_GRCz10UXA9EdGMUhzQfktjRQY1rQ si:dkey-33b17.3 7955 ortholog_many2many
UG_GRCz10wltTzso6YqZ7oUF5AWHH5w si:zfos-2070c2.3 7955 ortholog_many2many

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