RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38-4eYUX4omuxa-0wHrS7iCQ
Description:vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:12713]
Name(s) VPS41, HVSP41
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 7:38722963-38932394 - protein_coding
Expressed in:
  Adipose, Adrenal, Bladder, Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, HK-2 Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Muscle, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Proximal Tubule, Testis
Enriched in:
  Bladder, Brain, Breast, Colon, Heart, HEK-293 Cells, HEK-293T Cells, HK-2 Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Nephron Progenitor Cells, Ovary, Testis
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh381w0VzCQxRsAZ12J70dSrFA VPS41-003 transcript 7:38796745-38909191 (-) GRCh38
UT_GRCh383X1dmKGHNOucJ79597Fglg VPS41-012 transcript 7:38795492-38831346 (-) GRCh38
UT_GRCh384ipw5kj5rsm_YpZdAa2b5g VPS41-002 transcript 7:38725555-38909174 (-) GRCh38
UT_GRCh388bdFfUKeKCdOIPlNQk0cVg VPS41-013 transcript 7:38821218-38932394 (-) GRCh38
UT_GRCh389bM3efo0ZaPFxTSIg0bBhA VPS41-006 transcript 7:38741284-38745562 (-) GRCh38
UT_GRCh38B3QqEtHa99hzkzd26HKzUA VPS41-004 transcript 7:38726236-38745581 (-) GRCh38
UT_GRCh38hzGGbS4CKIbZVQyMn1hwFw VPS41-001 transcript 7:38722963-38909229 (-) GRCh38
UT_GRCh38I3VgEYMQ3LA906n9UY9-XQ VPS41-005 transcript 7:38726109-38727186 (-) GRCh38
UT_GRCh38j3e-qNaB-ohrfafo_iSCWg VPS41-007 transcript 7:38726319-38745998 (-) GRCh38
UT_GRCh38kzb6-xCqS20oSga8Hj44AQ VPS41-010 transcript 7:38795542-38909191 (-) GRCh38
UT_GRCh38LZ32_1rCCReb23lqBCO0ZQ VPS41-011 transcript 7:38772599-38797041 (-) GRCh38
UT_GRCh38QGdmDI_tnHGlTUZsxBQfcA VPS41-009 transcript 7:38774158-38775672 (-) GRCh38
UT_GRCh38SJIvHRpYw7z_RiZyT4JfAA VPS41-008 transcript 7:38758402-38765753 (-) GRCh38
UT_GRCh38tD4CdIr4GoqYoMv-bpSuKg VPS41-014 transcript 7:38817803-38929560 (-) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology
GO ID Domain Evidence Type GO Description
GO:0003674 molecular_function ND molecular_function
GO:0005515 molecular_function IEA protein binding
GO:0005515 molecular_function IPI protein binding
GO:0005765 cellular_component IDA lysosomal membrane
GO:0005769 cellular_component IEA early endosome
GO:0005770 cellular_component IBA late endosome
GO:0005770 cellular_component IEA late endosome
GO:0005794 cellular_component IEA Golgi apparatus
GO:0005798 cellular_component IEA Golgi-associated vesicle
GO:0005798 cellular_component IMP Golgi-associated vesicle
GO:0005829 cellular_component IDA cytosol
GO:0006623 biological_process IBA protein targeting to vacuole
GO:0006886 biological_process IEA intracellular protein transport
GO:0006914 biological_process IEA autophagy
GO:0008017 molecular_function IEA microtubule binding
GO:0008150 biological_process ND biological_process
GO:0008270 molecular_function IEA zinc ion binding
GO:0008333 biological_process IMP endosome to lysosome transport
GO:0010008 cellular_component IDA endosome membrane
GO:0015630 cellular_component IEA microtubule cytoskeleton
GO:0016020 cellular_component IDA membrane
GO:0016192 biological_process IEA vesicle-mediated transport
GO:0030123 cellular_component IDA AP-3 adaptor complex
GO:0030123 cellular_component IEA AP-3 adaptor complex
GO:0030136 cellular_component IDA clathrin-coated vesicle
GO:0030897 cellular_component IDA HOPS complex
GO:0031902 cellular_component IDA late endosome membrane
GO:0033263 cellular_component IBA CORVET complex
GO:0034058 biological_process IMP endosomal vesicle fusion
GO:0035542 biological_process IBA regulation of SNARE complex asse
GO:0042144 biological_process IBA vacuole fusion, non-autophagic
GO:0042802 molecular_function IPI identical protein binding
GO:0043621 molecular_function IEA protein self-association
GO:0045055 biological_process IEA regulated secretory pathway
GO:0048193 biological_process IMP Golgi vesicle transport
GO:0051020 molecular_function IBA GTPase binding
GO:0071439 cellular_component IDA clathrin complex
GO:1902774 biological_process IMP late endosome to lysosome transp

Homologs
Accession Description Species Homolog Type
UG_GRCm38lYLQ0NVYiONthp3o4f2iHg Vps41 10090 ortholog_one2one
UG_GRCz10FfNXE1ns_VKTU3fhzhUvlw vps41 7955 ortholog_one2one

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