RenalDB: A Knowledge Database for Kidney RNA Expression
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Accession: UG_GRCh38-IlwvuJHY8EP_8cOb4kxKA
Description:poly(A)-specific ribonuclease [Source:HGNC Symbol;Acc:HGNC:8609]
Name(s) PARN, DAN
Other IDs:
Tax IDPositionStrandBiotype(s)
9606 16:14435701-14632728 - protein_coding
Expressed in:
  Adipose, Adrenal, Bladder, Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, HK-2 Cells, Kidney, Kidney Cortex, Kidney Tubules, Liver, Lung, Muscle, Nephron Progenitor Cells, Nephrons, Ovary, Placenta, Proximal Tubule, Testis
Enriched in:
  Brain, Breast, Colon, Epithelial Cells, Heart, HEK-293 Cells, HEK-293F Cells, HEK-293T Cells, Kidney, Kidney Cortex, Liver, Lung, Muscle, Ovary, Placenta, Testis
Specific to:
  None
Parents
None
Children
Accession Name Sequence Type Position Assembly
UT_GRCh38-3uS_7Kt7PNlxktWrGrDOw PARN-011 transcript 16:14555654-14592077 (-) GRCh38
UT_GRCh380WcyZyuQUl5BngTtPKbkpg PARN-012 transcript 16:14576072-14584791 (-) GRCh38
UT_GRCh384HELU1w_2M-FHv3mSJmGbA PARN-013 transcript 16:14555686-14584760 (-) GRCh38
UT_GRCh385ajdUAtgKF-xCCmzXfpVrg PARN-009 transcript 16:14608107-14610699 (-) GRCh38
UT_GRCh386y0x9vYUOa7eAzs4wOAIig PARN-004 transcript 16:14436668-14630238 (-) GRCh38
UT_GRCh387TKrEIAWsaRZDTNT-XB4bA PARN-008 transcript 16:14610665-14630251 (-) GRCh38
UT_GRCh38acH4-UuQf_gFpHaVeTJO5A PARN-006 transcript 16:14627176-14632728 (-) GRCh38
UT_GRCh38gdxJhvTzSq1bfXGFnprnIA PARN-005 transcript 16:14599935-14630218 (-) GRCh38
UT_GRCh38L6XUIu2HsjubdxoX85OGSA PARN-010 transcript 16:14555654-14610743 (-) GRCh38
UT_GRCh38mTGGj5saYeA4wKsBGwpBXA PARN-007 transcript 16:14586318-14630260 (-) GRCh38
UT_GRCh38QYl8-uEzt5aUMsNdv9flVw PARN-003 transcript 16:14436273-14630259 (-) GRCh38
UT_GRCh38sW1jogbPCEL1TXMoTCSAYA PARN-015 transcript 16:14482638-14565075 (-) GRCh38
UT_GRCh38w8SlArQEQuxTb4q14tAwjw PARN-001 transcript 16:14435701-14630267 (-) GRCh38
UT_GRCh38Zcgaj6-D2Y7-AtMi4esdzw PARN-002 transcript 16:14436605-14630276 (-) GRCh38
UT_GRCh38_EaGw7zFsMydbaygNYyMOA PARN-014 transcript 16:14446957-14501689 (-) GRCh38

Expression Patterns




Heat Map
Numeric Values
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Gene Ontology
GO ID Domain Evidence Type GO Description
GO:0000166 molecular_function IEA nucleotide binding
GO:0000184 biological_process IMP nuclear-transcribed mRNA catabol
GO:0000288 biological_process TAS nuclear-transcribed mRNA catabol
GO:0000289 biological_process TAS nuclear-transcribed mRNA poly(A)
GO:0003676 molecular_function IEA nucleic acid binding
GO:0003723 molecular_function IEA RNA binding
GO:0003730 molecular_function TAS mRNA 3'-UTR binding
GO:0004518 molecular_function TAS nuclease activity
GO:0004535 molecular_function IEA poly(A)-specific ribonuclease ac
GO:0004535 molecular_function TAS poly(A)-specific ribonuclease ac
GO:0005515 molecular_function IPI protein binding
GO:0005634 cellular_component IEA nucleus
GO:0005634 cellular_component TAS nucleus
GO:0005730 cellular_component IEA nucleolus
GO:0005737 cellular_component IEA cytoplasm
GO:0005737 cellular_component TAS cytoplasm
GO:0005829 cellular_component TAS cytosol
GO:0006402 biological_process IEA mRNA catabolic process
GO:0007292 biological_process TAS female gamete generation
GO:0009451 biological_process TAS RNA modification
GO:0010467 biological_process TAS gene expression
GO:0019901 molecular_function IPI protein kinase binding
GO:0043488 biological_process TAS regulation of mRNA stability
GO:0044822 molecular_function IDA poly(A) RNA binding
GO:0046872 molecular_function IEA metal ion binding
GO:0090305 biological_process TAS nucleic acid phosphodiester bond
GO:0090503 biological_process IEA RNA phosphodiester bond hydrolys
GO:0090503 biological_process TAS RNA phosphodiester bond hydrolys

Homologs
Accession Description Species Homolog Type
UG_GRCm38f9-2GsePmonYqIJoX93ojQ Parn 10090 ortholog_one2one
UG_GRCz10FYAWvUpXyvfahGD7yDB-6w parn 7955 ortholog_one2one

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